Student Research · AI and Computer Science

Examining Machine Learning Models That Predict sgRNA Cleavage Efficiencies

Mentored by Dr. Rajagopal Appavu · with Coach Jo

AI and Computer Science August 2022 Published in Journal of Student Research
Abstract

Ever since its discovery, CRISPR-Cas9 has taken over the world in gene editing. By providing a single guide RNA to the cas9 enzyme, CRISPR-Cas9 can immediately pinpoint the target gene location in the genome and slice it. Scientists discovered a revolutionary way to use this method for gene editing. Yet, the challenge is that the CRISPR-Cas9 system is lenient with the matching precision of the guide RNA to the target sequence As a result, the CRISPR-cas9 system may also cleave certain healthy sequences that are almost identical to the target sequence. This paper aims to find the best model that uses machine learning to predict an optimal sgRNA design.

Cite this work

Citation

Kawle, K. (2022). Examining Machine Learning Models That Predict sgRNA Cleavage Efficiencies. Gifted Gabber Research Archive. https://www.giftedgabber.com/paper/examining-machine-learning-models-predict-sgrna-kawle
Read the full paper

Examining Machine Learning Models That Predict sgRNA Cleavage Efficiencies

About the author

Student researcher

K
Krish Kawle
Gifted Gabber Research Program

Completed through the 2022 Research Program at Gifted Gabber.

Original publication

Published in Journal of Student Research

Vol. 11 No. 3 (2022)

These links open archived snapshots — JSR's live site is currently unstable, so we route through the Internet Archive's Wayback Machine for reliable access to the original publication.

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